Dear Customer (name blocked for privacy),
I don't think that the frequent baths are the problem. Some species of flies are especially attracted to certain areas of an animal's body. The only thing you can do to help your pet is to apply one of the specially formulated pet insecticides to the affected areas. I really like the ones that come prepared as a cream. There is a brand named "Flys off" which is really effective. You can get these prducts from your local vet or agro store, or on the web, you can try www.petsmart.com or any other vet distributor of your preference.
Best wishes,
Dr. Monika List, DVM